First off, you don't need to do water changes so frequently unless your filter isn't working properly. I have an Eheim professional II that I've had on my 75 gallon for over 4 years now with zero problems.
Also, when you do clean out the filter, I would not vacuum your gravel for at least a couple of weeks before so beneficial bacteria can grow on it. I would also alternate vacuuming half of the tank at a time for the same reason. Whenever you disturb the gravel, you're killing off some of the bacteria, so you don't want to do too much at once.